graph: { title:"Up-regulated gene neighborhoods identified by
Graph-based iterative Group Analysis of the
yeast diauxic shift experiment by DeRisi et al."
layout_algorithm:forcedir
colorentry 32: 160 160 160 //====================================
colorentry 42: 230 230 230 // aiSee -- Graph Visualization
colorentry 43: 240 240 210 // http://www.aiSee.com
colorentry 44: 255 0 0 // © Copyright 1998-2004
colorentry 45: 255 70 70 // AbsInt Angewandte Informatik GmbH
colorentry 46: 255 140 140 // aiSee@AbsInt.com
colorentry 47: 255 210 210 //------------------------------------
colorentry 48: 0 255 0 // Graph courtesy of R. Breitling,
colorentry 49: 70 255 70 // A. Amtmann and P. Herzyk,
colorentry 50: 140 255 140 // University of Glasgow, UK
colorentry 51: 210 255 210 //====================================
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magnetic_field1:circular
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label:"17 genes\nisocitrate\nlyase et al.\np=1.04e-024"
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edge: {source:"YCR005C" target:"CoA"}
edge: {source:"YEL012W" target:"AMP"}
edge: {source:"YEL012W" target:"diphosphate"}
edge: {source:"YML042W" target:"CoA"}
edge: {source:"YNL117W" target:"CoA"}
edge: {source:"YNR001C" target:"CoA"}
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edge: {source:"YCR005C" target:"Acetyl-CoA"}
edge: {source:"YML042W" target:"Acetyl-CoA"}
edge: {source:"YNL117W" target:"Acetyl-CoA"}
edge: {source:"YNR001C" target:"Acetyl-CoA"}
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edge: {source:"YNR001C" target:"oxaloacetate"}
node: {title:"YDL215C" label:"NAD-dependent\nglutamate\ndehydrogenase" color:45
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edge: {source:"YIL125W" target:"2-oxoglutarate"}
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edge: {source:"YLR174W" target:"2-oxoglutarate"}
edge: {source:"YMR250W" target:"L-glutamate"}
edge: {source:"YNL009W" target:"2-oxoglutarate"}
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edge: {source:"YNL009W" target:"Isocitrate"}
edge: {source:"YNL117W" target:"glyoxylate"}
node: {title:"YIL125W" label:"alpha-ketoglutarate\ndehydrogenase" color:45
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edge: {source:"YLR174W" target:"CO(2)"}
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edge: {source:"YNL009W" target:"CO(2)"}
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node: {title:"YKR097W" label:"phosphoenolpyruvate\ncarboxylkinase" color:44
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edge: {source:"YNL009W" target:"NADP(+)"}
edge: {source:"YNL009W" target:"NADPH"}
node: {title:"YML042W" label:"carnitine\nO-acetyltransferase" color:45
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edge: {source:"YLR174W" target:"NADP(+)"}
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node: {title:"YNL117W" label:"carbon-catabolite\nsensitive malate\nsynthase" color:44
info1:"YNL117W" info2:"7"
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edge: {source:"YER065C" target:"glyoxylate"}
node: {title:"YNR001C" label:"citrate\nsynthase" color:45
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edge: {source:"YCR005C" target:"citrate"}
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edge: {source:"YMR170C" target:"An aldehyde"}
edge: {source:"YMR170C" target:"an acid"}
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node: {title:"citrate" fontname:"helvR08" borderwidth:1 bordercolor:32
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edge: {source:"YGL191W" target:"4 ferricytochrome c"}
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edge: {source:"YHR051W" target:"2 H(2)O"}
edge: {source:"YHR051W" target:"4 ferricytochrome c"}
edge: {source:"YHR051W" target:"4 ferrocytochrome c"}
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edge: {source:"YIL111W" target:"2 H(2)O"}
edge: {source:"YIL111W" target:"4 ferricytochrome c"}
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edge: {source:"YLR038C" target:"4 ferrocytochrome c"}
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edge: {source:"YLR395C" target:"2 H(2)O"}
edge: {source:"YLR395C" target:"4 ferricytochrome c"}
edge: {source:"YLR395C" target:"4 ferrocytochrome c"}
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edge: {source:"YNL052W" target:"2 H(2)O"}
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edge: {source:"YNL052W" target:"O(2)"}
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node: {title:"YGL187C" label:"cytochrome\nc oxidase\nsubunit IV" color:46
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node: {title:"YHR051W" label:"cytochrome\nc oxidase\nsubunit" color:45
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node: {title:"YIL111W" label:"cytochrome\nc oxidase\nchain Vb" color:47
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node: {title:"YKL026C" label:"Glutathione\nperoxidase\nparalogue" color:45
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node: {title:"YLR038C" label:"cytochrome\nc oxidase\nsubunit VIb" color:46
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node: {title:"YLR395C" label:"cytochrome\nc oxidase\nchain VIII" color:46
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node: {title:"YNL052W" label:"cytochrome\nc oxidase\nchain Va" color:45
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label:"5 genes\nL-lactate\ncytochrome\nc\noxidoreductase|cytochrome\nb2 et al.\np=5.79e-007"
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edge: {source:"YFR033C" target:"2 ferricytochrome c"}
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info1:"YLR377C" info2:"3"
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onMouseOut:noInfo(evt, 'YLR377C');"}
edge: {source:"YGR043C" target:"D-fructose 6-phosphate"}
node: {title:"Sedoheptulose 7-phosphate" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, 'Sedoheptulose 7-phosphate');onMouseOut:UnCol(evt, 'Sedoheptulose 7-phosphate');"}
node: {title:"D-glyceraldehyde 3-phosphate" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, 'D-glyceraldehyde 3-phosphate');onMouseOut:UnCol(evt, 'D-glyceraldehyde 3-phosphate');"}
node: {title:"D-fructose 6-phosphate" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, 'D-fructose 6-phosphate');onMouseOut:UnCol(evt, 'D-fructose 6-phosphate');"}
}
edge: {source: "VIRTUAL CENTER" target:"SUBGRAPH YJL045W" linestyle:invisible priority:10}
graph: {title:"SUBGRAPH YJL045W" status:unfolded color:42
label:"3 genes\nsimilar to\nSDH1 et al.\np=1.56e-004"
node: {title:"YJL045W" label:"Similar\nto SDH1" color:45
info1:"YJL045W" info2:"20"
info3:"onMouseOver:showInfo(evt, 'YJL045W','20','-0.357','Similar to SDH1');onMouseOut:noInfo(evt, 'YJL045W');"}
edge: {source:"YKL148C" target:"Succinate"}
edge: {source:"YKL148C" target:"fumarate"}
edge: {source:"YKL148C" target:"ubiquinol"}
edge: {source:"YKL148C" target:"ubiquinone"}
edge: {source:"YLL041C" target:"Succinate"}
edge: {source:"YLL041C" target:"fumarate"}
edge: {source:"YLL041C" target:"ubiquinol"}
edge: {source:"YLL041C" target:"ubiquinone"}
node: {title:"YKL148C" label:"succinate\ndehydrogenase\nflavoprotein\nsubunit" color:46
info1:"YKL148C" info2:"41"
info3:"onMouseOver:showInfo(evt, 'YKL148C','41','0.006','succinate dehydrogenase flavoprotein subunit');
onMouseOut:noInfo(evt, 'YKL148C');"}
edge: {source:"YJL045W" target:"Succinate"}
edge: {source:"YJL045W" target:"fumarate"}
edge: {source:"YJL045W" target:"ubiquinol"}
edge: {source:"YJL045W" target:"ubiquinone"}
node: {title:"YLL041C" label:"succinate\ndehydrogenase\n(ubiquinone)\niron-sulfur\nprotein..." color:45
info1:"YLL041C" info2:"22"
info3:"onMouseOver:showInfo(evt, 'YLL041C','22','0.014','succinate dehydrogenase (ubiquinone) iron-sulfur protein...');
onMouseOut:noInfo(evt, 'YLL041C');"}
node: {title:"fumarate" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, 'fumarate');onMouseOut:UnCol(evt, 'fumarate');"}
node: {title:"Succinate" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, 'Succinate');onMouseOut:UnCol(evt, 'Succinate');"}
node: {title:"ubiquinol" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, 'ubiquinol');onMouseOut:UnCol(evt, 'ubiquinol');"}
node: {title:"ubiquinone" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, 'ubiquinone');onMouseOut:UnCol(evt, 'ubiquinone');"}
}
edge: {source: "VIRTUAL CENTER" target:"SUBGRAPH YFR015C" linestyle:invisible priority:10}
graph: {title:"SUBGRAPH YFR015C" status:unfolded color:43
label:"3 genes\nglycogen\nsynthase\n(UDP-glucose-starch\nglucosyltransferase) et al.\np=2.08e-004"
node: {title:"YFR015C" label:"glycogen synthase\n(UDP-glucose-starch\nglucosyltransferase)" color:45
info1:"YFR015C" info2:"13"
info3:"onMouseOver:showInfo(evt, 'YFR015C','13','-0.595','glycogen synthase (UDP-glucose-starch glucosyltransferase)');
onMouseOut:noInfo(evt, 'YFR015C');"}
edge: {source:"YLR258W" target:"UDP"}
edge: {source:"YLR258W" target:"UDP-glucose"}
edge: {source:"YLR258W" target:"{(1,4)-alpha-D-glucosyl}(N)"}
edge: {source:"YLR258W" target:"{(1,4)-alpha-D-glucosyl}(N+1)"}
edge: {source:"YML100W" target:"UDP"}
edge: {source:"YML100W" target:"UDP-glucose"}
node: {title:"YLR258W" label:"glycogen synthase\n(UDP-glucose-starch\nglucosyltransferase)" color:45
info1:"YLR258W" info2:"18"
info3:"onMouseOver:showInfo(evt, 'YLR258W','18','0.133','glycogen synthase (UDP-glucose-starch glucosyltransferase)');
onMouseOut:noInfo(evt, 'YLR258W');"}
edge: {source:"YFR015C" target:"UDP"}
edge: {source:"YFR015C" target:"UDP-glucose"}
edge: {source:"YFR015C" target:"{(1,4)-alpha-D-glucosyl}(N)"}
edge: {source:"YFR015C" target:"{(1,4)-alpha-D-glucosyl}(N+1)"}
node: {title:"YML100W" label:"similar to TPS3 gene\nproduct|trehalose-6-phosphate..." color:46
info1:"YML100W" info2:"45"
info3:"onMouseOver:showInfo(evt, 'YML100W','45','0.366','similar to TPS3 gene product|trehalose-6-phosphate...');
onMouseOut:noInfo(evt, 'YML100W');"}
node: {title:"UDP-glucose" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, 'UDP-glucose');onMouseOut:UnCol(evt, 'UDP-glucose');"}
node: {title:"{(1,4)-alpha-D-glucosyl}(N)" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, '{(1,4)-alpha-D-glucosyl}(N)');
onMouseOut:UnCol(evt, '{(1,4)-alpha-D-glucosyl}(N)');"}
node: {title:"UDP" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, 'UDP');onMouseOut:UnCol(evt, 'UDP');"}
node: {title:"{(1,4)-alpha-D-glucosyl}(N+1)" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, '{(1,4)-alpha-D-glucosyl}(N+1)');
onMouseOut:UnCol(evt, '{(1,4)-alpha-D-glucosyl}(N+1)');"}
}
edge: {source: "VIRTUAL CENTER" target:"SUBGRAPH YJR073C" linestyle:invisible priority:10}
graph: {title:"SUBGRAPH YJR073C" status:unfolded color:42
label:"5 genes\nunsaturated\nphospholipid\nN-methyltransferase et al.\np=3.85e-004"
node: {title:"YDL033C" label:"Hypothetical\nORF" color:47
info1:"YDL033C" info2:"131"
info3:"onMouseOver:showInfo(evt, 'YDL033C','131','-0.02','Hypothetical ORF');
onMouseOut:noInfo(evt, 'YDL033C');"}
edge: {source:"YGL192W" target:"S-adenosyl-L-homocysteine"}
edge: {source:"YGL192W" target:"S-adenosyl-L-methionine"}
edge: {source:"YJR073C" target:"S-adenosyl-L-homocysteine"}
edge: {source:"YJR073C" target:"S-adenosyl-L-methionine"}
edge: {source:"YML110C" target:"S-adenosyl-L-homocysteine"}
edge: {source:"YML110C" target:"S-adenosyl-L-methionine"}
edge: {source:"YOL096C" target:"S-adenosyl-L-homocysteine"}
edge: {source:"YOL096C" target:"S-adenosyl-L-methionine"}
node: {title:"YGL192W" label:"methyltransferase" color:47
info1:"YGL192W" info2:"89"
info3:"onMouseOver:showInfo(evt, 'YGL192W','89','-0.024','methyltransferase');
onMouseOut:noInfo(evt, 'YGL192W');"}
edge: {source:"YDL033C" target:"S-adenosyl-L-homocysteine"}
edge: {source:"YDL033C" target:"S-adenosyl-L-methionine"}
node: {title:"YJR073C" label:"unsaturated\nphospholipid\nN-methyltransferase" color:46
info1:"YJR073C" info2:"53"
info3:"onMouseOver:showInfo(evt, 'YJR073C','53','-0.063','unsaturated phospholipid N-methyltransferase');
onMouseOut:noInfo(evt, 'YJR073C');"}
node: {title:"YML110C" label:"C-methyltransferase\n(putative)" color:46
info1:"YML110C" info2:"156"
info3:"onMouseOver:showInfo(evt, 'YML110C','156','0.017','C-methyltransferase (putative)');
onMouseOut:noInfo(evt, 'YML110C');"}
node: {title:"YOL096C" label:"3,4-dihydroxy-5-hexaprenylbenzoate\nmethyltransferase" color:46
info1:"YOL096C" info2:"151"
info3:"onMouseOver:showInfo(evt, 'YOL096C','151','-0.312','3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase');
onMouseOut:noInfo(evt, 'YOL096C');"}
node: {title:"S-adenosyl-L-methionine" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, 'S-adenosyl-L-methionine');onMouseOut:UnCol(evt, 'S-adenosyl-L-methionine');"}
node: {title:"S-adenosyl-L-homocysteine" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, 'S-adenosyl-L-homocysteine');onMouseOut:UnCol(evt, 'S-adenosyl-L-homocysteine');"}
}
edge: {source: "VIRTUAL CENTER" target:"SUBGRAPH YDR001C" linestyle:invisible priority:10}
graph: {title:"SUBGRAPH YDR001C" status:unfolded color:43
label:"3 genes\nneutral\ntrehalase et al.\np=5.01e-004"
node: {title:"YBR001C" label:"neutral\ntrehalase" color:46
info1:"YBR001C" info2:"58"
info3:"onMouseOver:showInfo(evt, 'YBR001C','58','0.129','neutral trehalase');
onMouseOut:noInfo(evt, 'YBR001C');"}
edge: {source:"YDR001C" target:"2 D-glucose"}
edge: {source:"YDR001C" target:"Alpha,alpha-trehalose"}
edge: {source:"YPR026W" target:"2 D-glucose"}
edge: {source:"YPR026W" target:"Alpha,alpha-trehalose"}
node: {title:"YDR001C" label:"neutral\ntrehalase" color:46
info1:"YDR001C" info2:"49"
info3:"onMouseOver:showInfo(evt, 'YDR001C','49','0.233','neutral trehalase');
onMouseOut:noInfo(evt, 'YDR001C');"}
edge: {source:"YBR001C" target:"2 D-glucose"}
edge: {source:"YBR001C" target:"Alpha,alpha-trehalose"}
node: {title:"YPR026W" label:"acid\ntrehalase" color:46
info1:"YPR026W" info2:"60"
info3:"onMouseOver:showInfo(evt, 'YPR026W','60','-0.005','acid trehalase');
onMouseOut:noInfo(evt, 'YPR026W');"}
node: {title:"Alpha,alpha-trehalose" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, 'Alpha,alpha-trehalose');onMouseOut:UnCol(evt, 'Alpha,alpha-trehalose');"}
node: {title:"2 D-glucose" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, '2 D-glucose');onMouseOut:UnCol(evt, '2 D-glucose');"}
}
edge: {source:"VIRTUAL CENTER" target:"SUBGRAPH YCR014C" linestyle:invisible priority:10}
graph: {title:"SUBGRAPH YCR014C" status:unfolded color:42
label:"17 genes\nDNA\npolymerase\nIV et al.\np=5.44e-004"
node: {title:"YBR278W" label:"DNA\npolymerase II\nC and..." color:46
info1:"YBR278W" info2:"220"
info3:"onMouseOver:showInfo(evt, 'YBR278W','220','-0.194','DNA polymerase II C and...');
onMouseOut:noInfo(evt, 'YBR278W');"}
edge: {source:"YCL031C" target:"N diphosphate"}
edge: {source:"YCR014C" target:"N deoxynucleoside triphosphate"}
edge: {source:"YCR014C" target:"N diphosphate"}
edge: {source:"YCR014C" target:"{DNA}(N)"}
edge: {source:"YDL102W" target:"N deoxynucleoside triphosphate"}
edge: {source:"YDL102W" target:"N diphosphate"}
edge: {source:"YDL102W" target:"{DNA}(N)"}
edge: {source:"YDR045C" target:"N diphosphate"}
edge: {source:"YFL036W" target:"N diphosphate"}
edge: {source:"YJL140W" target:"N diphosphate"}
edge: {source:"YJR006W" target:"N deoxynucleoside triphosphate"}
edge: {source:"YJR006W" target:"N diphosphate"}
edge: {source:"YJR006W" target:"{DNA}(N)"}
edge: {source:"YKL144C" target:"N diphosphate"}
edge: {source:"YKR002W" target:"N diphosphate"}
edge: {source:"YNL151C" target:"N diphosphate"}
edge: {source:"YNL262W" target:"N deoxynucleoside triphosphate"}
edge: {source:"YNL262W" target:"N diphosphate"}
edge: {source:"YNL262W" target:"{DNA}(N)"}
edge: {source:"YOL005C" target:"N diphosphate"}
edge: {source:"YOR151C" target:"N diphosphate"}
edge: {source:"YOR210W" target:"N diphosphate"}
edge: {source:"YPL167C" target:"N deoxynucleoside triphosphate"}
edge: {source:"YPL167C" target:"N diphosphate"}
edge: {source:"YPL167C" target:"{DNA}(N)"}
edge: {source:"YPR010C" target:"N diphosphate"}
node: {title:"YCL031C" label:"involved\nin\nrRNA\nprocessing" color:46
info1:"YCL031C" info2:"412"
info3:"onMouseOver:showInfo(evt, 'YCL031C','412','0.125','involved in rRNA processing');
onMouseOut:noInfo(evt, 'YCL031C');"}
edge: {source:"YBR278W" target:"N diphosphate"}
edge: {source:"YDR045C" target:"N nucleoside triphosphate"}
edge: {source:"YDR045C" target:"{RNA}(N)"}
edge: {source:"YFL036W" target:"N nucleoside triphosphate"}
edge: {source:"YFL036W" target:"{RNA}(N)"}
edge: {source:"YJL140W" target:"N nucleoside triphosphate"}
edge: {source:"YJL140W" target:"{RNA}(N)"}
edge: {source:"YKL144C" target:"N nucleoside triphosphate"}
edge: {source:"YKL144C" target:"{RNA}(N)"}
edge: {source:"YNL151C" target:"N nucleoside triphosphate"}
edge: {source:"YNL151C" target:"{RNA}(N)"}
edge: {source:"YOL005C" target:"N nucleoside triphosphate"}
edge: {source:"YOL005C" target:"{RNA}(N)"}
edge: {source:"YOR151C" target:"N nucleoside triphosphate"}
edge: {source:"YOR151C" target:"{RNA}(N)"}
edge: {source:"YOR210W" target:"N nucleoside triphosphate"}
edge: {source:"YOR210W" target:"{RNA}(N)"}
edge: {source:"YPR010C" target:"N nucleoside triphosphate"}
edge: {source:"YPR010C" target:"{RNA}(N)"}
node: {title:"YCR014C" label:"DNA\npolymerase\nIV" color:46
info1:"YCR014C" info2:"199"
info3:"onMouseOver:showInfo(evt, 'YCR014C','199','0.117','DNA polymerase IV');
onMouseOut:noInfo(evt, 'YCR014C');"}
edge: {source:"YBR278W" target:"N deoxynucleoside triphosphate"}
edge: {source:"YBR278W" target:"{DNA}(N)"}
node: {title:"YDL102W" label:"DNA\npolymerase\nIII\ncatalytic\n(delta)..." color:46
info1:"YDL102W" info2:"471"
info3:"onMouseOver:showInfo(evt, 'YDL102W','471','0.002','DNA polymerase III catalytic (delta)...');
onMouseOut:noInfo(evt, 'YDL102W');"}
node: {title:"YDR045C" label:"TFIIS-like\nsmall\nPol\nIII\nsubunit..." color:46
info1:"YDR045C" info2:"479"
info3:"onMouseOver:showInfo(evt, 'YDR045C','479','0.233','TFIIS-like small Pol III subunit...');
onMouseOut:noInfo(evt, 'YDR045C');"}
edge: {source:"YCL031C" target:"N nucleoside triphosphate"}
edge: {source:"YCL031C" target:"{RNA}(N)"}
node: {title:"YFL036W" label:"mitochondrial\nRNA\npolymerase" color:46
info1:"YFL036W" info2:"336"
info3:"onMouseOver:showInfo(evt, 'YFL036W','336','-0.164','mitochondrial RNA polymerase');
onMouseOut:noInfo(evt, 'YFL036W');"}
node: {title:"YJL140W" label:"RNA\npolymerase II\nfourth largest..." color:46
info1:"YJL140W" info2:"426"
info3:"onMouseOver:showInfo(evt, 'YJL140W','426','0.115','RNA polymerase II fourth largest...');
onMouseOut:noInfo(evt, 'YJL140W');"}
node: {title:"YJR006W" label:"DNA\npolymerase\ndelta 55\nkDa..." color:46
info1:"YJR006W" info2:"295"
info3:"onMouseOver:showInfo(evt, 'YJR006W','295','-0.574','DNA polymerase delta 55 kDa...');
onMouseOut:noInfo(evt, 'YJR006W');"}
node: {title:"YKL144C" label:"RNA\npolymerase III\nsubunit" color:46
info1:"YKL144C" info2:"441"
info3:"onMouseOver:showInfo(evt, 'YKL144C','441','-0.217','RNA polymerase III subunit');
onMouseOut:noInfo(evt, 'YKL144C');"}
node: {title:"YKR002W" label:"poly(A)\npolymerase" color:46
info1:"YKR002W" info2:"287"
info3:"onMouseOver:showInfo(evt, 'YKR002W','287','1.083','poly(A) polymerase');
onMouseOut:noInfo(evt, 'YKR002W');"}
node: {title:"YNL151C" label:"HMG1-like\nprotein|RNA\npolymerase III\n(C)..." color:46
info1:"YNL151C" info2:"465"
info3:"onMouseOver:showInfo(evt, 'YNL151C','465','0.351','HMG1-like protein|RNA polymerase III (C)...');
onMouseOut:noInfo(evt, 'YNL151C');"}
node: {title:"YNL262W" label:"DNA\npolymerase II" color:46
info1:"YNL262W" info2:"408"
info3:"onMouseOver:showInfo(evt, 'YNL262W','408','-0.025','DNA polymerase II');
onMouseOut:noInfo(evt, 'YNL262W');"}
node: {title:"YOL005C" label:"RNA\npolymerase II\ncore subunit" color:46
info1:"YOL005C" info2:"394"
info3:"onMouseOver:showInfo(evt, 'YOL005C','394','0.004','RNA polymerase II core subunit');
onMouseOut:noInfo(evt, 'YOL005C');"}
node: {title:"YOR151C" label:"second\nlargest\nsubunit\nof RNA..." color:46
info1:"YOR151C" info2:"481"
info3:"onMouseOver:showInfo(evt, 'YOR151C','481','0.351','second largest subunit of RNA...');
onMouseOut:noInfo(evt, 'YOR151C');"}
node: {title:"YOR210W" label:"RNA\npolymerase II\ncore subunit" color:46
info1:"YOR210W" info2:"239"
info3:"onMouseOver:showInfo(evt, 'YOR210W','239','-0.037','RNA polymerase II core subunit');
onMouseOut:noInfo(evt, 'YOR210W');"}
node: {title:"YPL167C" label:"DNA\npolymerase\nzeta subunit" color:46
info1:"YPL167C" info2:"305"
info3:"onMouseOver:showInfo(evt, 'YPL167C','305','-0.132','DNA polymerase zeta subunit');
onMouseOut:noInfo(evt, 'YPL167C');"}
node: {title:"YPR010C" label:"RNA\npolymerase I\nsubunit" color:46
info1:"YPR010C" info2:"335"
info3:"onMouseOver:showInfo(evt, 'YPR010C','335','-0.134','RNA polymerase I subunit');
onMouseOut:noInfo(evt, 'YPR010C');"}
node: {title:"N nucleoside triphosphate" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, 'N nucleoside triphosphate');
onMouseOut:UnCol(evt, 'N nucleoside triphosphate');"}
node: {title:"N deoxynucleoside triphosphate" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, 'N deoxynucleoside triphosphate');
onMouseOut:UnCol(evt, 'N deoxynucleoside triphosphate');"}
node: {title:"N diphosphate" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, 'N diphosphate');onMouseOut:UnCol(evt, 'N diphosphate');"}
node: {title:"{DNA}(N)" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, '{DNA}(N)');onMouseOut:UnCol(evt, '{DNA}(N)');"}
node: {title:"{RNA}(N)" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, '{RNA}(N)');onMouseOut:UnCol(evt, '{RNA}(N)');"}
}
edge: {source: "VIRTUAL CENTER" target:"SUBGRAPH YIR038C" linestyle:invisible priority:10}
graph: {title:"SUBGRAPH YIR038C" status:unfolded color:43
label:"5 genes\nglutathione\ntransferase et al.\np=8.64e-004"
node: {title:"YDR272W" label:"glyoxylase-II" color:47
info1:"YDR272W" info2:"86"
info3:"onMouseOver:showInfo(evt, 'YDR272W','86','0.016','glyoxylase-II');
onMouseOut:noInfo(evt, 'YDR272W');"}
edge: {source:"YIR038C" target:"glutathione"}
edge: {source:"YLL060C" target:"glutathione"}
edge: {source:"YML004C" target:"glutathione"}
edge: {source:"YOR040W" target:"(S)-(2-hydroxyacyl)glutathione"}
edge: {source:"YOR040W" target:"a 2-hydroxy acid anion"}
edge: {source:"YOR040W" target:"glutathione"}
node: {title:"YIR038C" label:"glutathione\ntransferase" color:46
info1:"YIR038C" info2:"57"
info3:"onMouseOver:showInfo(evt, 'YIR038C','57','0.185','glutathione transferase');
onMouseOut:noInfo(evt, 'YIR038C');"}
edge: {source:"YDR272W" target:"glutathione"}
edge: {source:"YLL060C" target:"HX"}
edge: {source:"YLL060C" target:"R-S-glutathione"}
edge: {source:"YLL060C" target:"RX"}
node: {title:"YLL060C" label:"glutathione\ntransferase" color:47
info1:"YLL060C" info2:"147"
info3:"onMouseOver:showInfo(evt, 'YLL060C','147','-0.123','glutathione transferase');
onMouseOut:noInfo(evt, 'YLL060C');"}
edge: {source:"YIR038C" target:"HX"}
edge: {source:"YIR038C" target:"R-S-glutathione"}
edge: {source:"YIR038C" target:"RX"}
node: {title:"YML004C" label:"lactoylglutathione\nlyase\n(glyoxalase I)" color:47
info1:"YML004C" info2:"103"
info3:"onMouseOver:showInfo(evt, 'YML004C','103','0.229','lactoylglutathione lyase (glyoxalase I)');
onMouseOut:noInfo(evt, 'YML004C');"}
node: {title:"YOR040W" label:"glyoxylase-II" color:47
info1:"YOR040W" info2:"183"
info3:"onMouseOver:showInfo(evt, 'YOR040W','183','-0.214','glyoxylase-II');
onMouseOut:noInfo(evt, 'YOR040W');"}
edge: {source:"YDR272W" target:"(S)-(2-hydroxyacyl)glutathione"}
edge: {source:"YDR272W" target:"a 2-hydroxy acid anion"}
node: {title:"glutathione" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, 'glutathione');onMouseOut:UnCol(evt, 'glutathione');"}
node: {title:"RX" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, 'RX');onMouseOut:UnCol(evt, 'RX');"}
node: {title:"(S)-(2-hydroxyacyl)glutathione" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, '(S)-(2-hydroxyacyl)glutathione');
onMouseOut:UnCol(evt, '(S)-(2-hydroxyacyl)glutathione');"}
node: {title:"HX" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, 'HX');onMouseOut:UnCol(evt, 'HX');"}
node: {title:"a 2-hydroxy acid anion" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, 'a 2-hydroxy acid anion');onMouseOut:UnCol(evt, 'a 2-hydroxy acid anion');"}
node: {title:"R-S-glutathione" fontname:"helvR08" borderwidth:1 bordercolor:32
info3:"onMouseOver:Col(evt, 'R-S-glutathione');onMouseOut:UnCol(evt, 'R-S-glutathione');"}
}
}
